If more than 50 genes/sequences are provided as input, then the associated running time can take some time. Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes. After processing you will be send an email with a link to the created phylogenetic tree.
The selection modi are exclusive: please choose either Gene selection or Species selection.
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":"";
$selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":"";
$num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0;
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ) $local_species = 'acertr' $disabled = '' $selected = ''
include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ) $local_species = 'ach' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ) $local_species = 'aar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ) $local_species = 'amhyb' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ) $local_species = 'atr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ) $local_species = 'aag' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ) $local_species = 'aox' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ) $local_species = 'aly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ) $local_species = 'ath' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ) $local_species = 'arhy' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ) $local_species = 'ama' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ) $local_species = 'bvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ) $local_species = 'bca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ) $local_species = 'bna' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ) $local_species = 'bol' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ) $local_species = 'bra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ) $local_species = 'camsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ) $local_species = 'cansat' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ) $local_species = 'cru' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ) $local_species = 'can' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ) $local_species = 'chi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ) $local_species = 'cpa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ) $local_species = 'cfa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ) $local_species = 'cil' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ) $local_species = 'cde' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ) $local_species = 'cbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ) $local_species = 'cqu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ) $local_species = 'car' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ) $local_species = 'cla' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ) $local_species = 'ccl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ) $local_species = 'ccan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ) $local_species = 'col' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ) $local_species = 'cav' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ) $local_species = 'cme' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ) $local_species = 'csa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ) $local_species = 'dca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ) $local_species = 'din' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ) $local_species = 'dzi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ) $local_species = 'eca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ) $local_species = 'egut' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ) $local_species = 'egr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ) $local_species = 'esa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ) $local_species = 'fve' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ) $local_species = 'fan' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ) $local_species = 'gma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ) $local_species = 'ghi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ) $local_species = 'gra' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ) $local_species = 'han' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ) $local_species = 'hma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ) $local_species = 'lsa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ) $local_species = 'lonja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ) $local_species = 'lja' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ) $local_species = 'lal' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ) $local_species = 'mbi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ) $local_species = 'mdo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ) $local_species = 'mes' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ) $local_species = 'mpo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ) $local_species = 'mtr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ) $local_species = 'mco' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ) $local_species = 'mco' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ) $local_species = 'nnu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ) $local_species = 'nta' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ) $local_species = 'oeu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ) $local_species = 'osa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ) $local_species = 'pso' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ) $local_species = 'pax' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ) $local_species = 'pvu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ) $local_species = 'ppa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ) $local_species = 'psa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ) $local_species = 'ptr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ) $local_species = 'ppe' $disabled = '' $selected = '' $num_hits = (int) 0
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ) $local_species = 'pgr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ) $local_species = 'qlo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ) $local_species = 'rsi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ) $local_species = 'rch' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ) $local_species = 'sbr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ) $local_species = 'sbo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ) $local_species = 'shi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ) $local_species = 'spa' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ) $local_species = 'sed' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ) $local_species = 'smo' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ) $local_species = 'sun' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ) $local_species = 'sgi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ) $local_species = 'sci' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ) $local_species = 'sly' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ) $local_species = 'spe' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ) $local_species = 'stu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ) $local_species = 'sas' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ) $local_species = 'tha' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ) $local_species = 'tca' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ) $local_species = 'tpr' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ) $local_species = 'twi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ) $local_species = 'tar' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ) $local_species = 'ugi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ) $local_species = 'vma' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ) $local_species = 'vpl' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ) $local_species = 'vmu' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ) $local_species = 'vvi' $disabled = '' $selected = '' $num_hits = (int) 1
Warning (2): count(): Parameter must be an array or an object that implements Countable [APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33]Code Context $disabled = (!array_key_exists($local_species,$species_gene_counts))?"disabled":""; $selected = (isset($selected_species) && array_key_exists($local_species,$selected_species))?"checked='checked'":""; $num_hits = (array_key_exists($local_species,$species_gene_counts))?count($species_gene_counts[$local_species]):0; $viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp, line 33 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/gf_data_settings.ctp, line 37 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Elements/analysis/phylogenetics_module/parameter_selection.ctp, line 64 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933 View::_renderElement() - CORE/Cake/View/View.php, line 1224 View::element() - CORE/Cake/View/View.php, line 418 include - APP/View/Analysis/custom_tree_creation.ctp, line 27 View::_evaluate() - CORE/Cake/View/View.php, line 971 View::_render() - CORE/Cake/View/View.php, line 933
$viewFile = '/www/bioinformatics01_ro/plaza/_dev_instances/feedback/app/View/Elements/analysis/phylogenetics_module/gf_data_settings_species_selection.ctp' $dataForView = array( 'sidebar_info' => array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ), 'sidebar' => 'gene_family_sidebar', 'navigation_bar_info' => array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ), 'allowed_extra_sequences_types' => array( 'aa' => 'Protein', 'dna' => 'DNA' ), 'allowed_editing_methods' => array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ), 'allowed_tree_programs' => array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ), 'allowed_msa_programs' => array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ), 'allowed_number_blasthits' => array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ), 'gf_genes' => array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ), 'gf_id' => 'HOM05D000545', 'gf_types_information' => array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ), 'gf_types_configuration' => array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ), 'all_species' => array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ), 'allow_async_use' => true, 'sidebar_information' => array( 'type' => 'gf', 'id' => 'HOM05D000545' ), 'data_identifier' => 'HOM05D000545', 'data_type' => 'gf_id' ) $sidebar_info = array( 'gf_id' => 'HOM05D000545', 'msa_exists' => array( 'full' => false, 'edited' => false ), 'tree_exists' => false, 'num_genes' => '1002', 'num_species' => '98' ) $sidebar = 'gene_family_sidebar' $navigation_bar_info = array( 'num_colinearity_runs' => (int) 1, 'num_colinearity_with_dating_runs' => (int) 0, 'num_functional_clusters_runs' => (int) 6, 'has_pan_genomes' => false ) $allowed_extra_sequences_types = array( 'aa' => 'Protein', 'dna' => 'DNA' ) $allowed_editing_methods = array( 'column' => 'Positions only', 'row' => 'Genes only', 'column_row' => 'Positions and Genes', 'none' => 'No editing' ) $allowed_tree_programs = array( 'fasttree' => 'FastTree', 'iqtree' => 'IQ-TREE (includes model testing)', 'raxml' => 'RAxML', 'phyml' => 'PhyML' ) $allowed_msa_programs = array( 'muscle' => 'MUSCLE', 'mafft' => 'MAFFT' ) $allowed_number_blasthits = array( (int) 0 => 'all', (int) 1 => (int) 20, (int) 2 => (int) 10, (int) 3 => (int) 5, (int) 4 => (int) 1 ) $gf_genes = array( 'A01p33880' => 'bna', 'A01p39600' => 'bna', 'A02p01540' => 'bna', 'A02p18300' => 'bna', 'A03p05650' => 'bna', 'A03p34270' => 'bna', 'A03p41970' => 'bna', 'A05p10920' => 'bna', 'A05p27800' => 'bna', 'A06p00500' => 'bna', 'A07p38940' => 'bna', 'A08p01170' => 'bna', 'A09p35960' => 'bna', 'A09p60290' => 'bna', 'A10p29900' => 'bna', 'Aa31LG10G1250' => 'aar', 'Aa31LG10G6610' => 'aar', 'Aa31LG3G14760' => 'aar', 'Aa31LG4G3170' => 'aar', 'Aa31LG5G16110' => 'aar', 'Aa31LG7G2370' => 'aar', 'Aa31LG8G7730' => 'aar', 'AagrBONN_evm.TU.Sc2ySwM_117.2516' => 'aag', 'Actinidia03873' => 'ach', 'Actinidia03981' => 'ach', 'Actinidia06344' => 'ach', 'Actinidia09348' => 'ach', 'Actinidia13486' => 'ach', 'Actinidia16336' => 'ach', 'Actinidia19398' => 'ach', 'Actinidia23975' => 'ach', 'Actinidia26036' => 'ach', 'Actinidia31068' => 'ach', 'Actinidia31069' => 'ach', 'Actinidia32173' => 'ach', 'Actinidia32364' => 'ach', 'Actinidia37759' => 'ach', 'Actinidia39090' => 'ach', 'Actinidia39688' => 'ach', 'Ah.04g151830' => 'amhyb', 'Ah.04g161940' => 'amhyb', 'Ah.04g162560' => 'amhyb', 'Ah.06g194150' => 'amhyb', 'Ah.08g216620' => 'amhyb', 'Ah.09g231290' => 'amhyb', 'AL1G29910' => 'aly', 'AL1G44530' => 'aly', 'AL1G62880' => 'aly', 'AL286U10010' => 'aly', 'AL2G32520' => 'aly', 'AL3G16380' => 'aly', 'AL3G26230' => 'aly', 'AL3G34870' => 'aly', 'AL481U10030' => 'aly', 'AL4G30710' => 'aly', 'AL6G16590' => 'aly', 'AL6G23390' => 'aly', 'Aqoxy1G00634' => 'aox', 'Aqoxy1G01567' => 'aox', 'Aqoxy2G00195' => 'aox', 'Aqoxy7G01100' => 'aox', 'Aqoxy7G04103' => 'aox', 'arahy.Tifrunner.gnm1.ann1.14IBSY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.3C4V56' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.40UHTZ' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.85VPHV' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.D979GK' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.E0X5DU' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.EWBI0W' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.H71SFY' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.HITK0G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K4Y63P' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.K8VWCH' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.P5AXXG' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.RS70VX' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.S6585G' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.TY3GKM' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.V1T15D' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VF6U6X' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.VP74QW' => 'arhy', 'arahy.Tifrunner.gnm1.ann1.WXE8TN' => 'arhy', 'AT1G17590' => 'ath', 'AT1G30500' => 'ath', 'AT1G54160' => 'ath', 'AT1G72830' => 'ath', 'AT2G34720' => 'ath', 'AT3G05690' => 'ath', 'AT3G14020' => 'ath', 'AT3G20910' => 'ath', 'AT5G06510' => 'ath', 'AT5G12840' => 'ath', 'ATR0165G045' => 'atr', 'ATR0332G043' => 'atr', 'ATR0598G162' => 'atr', 'ATR0598G331' => 'atr', 'ATR0697G266' => 'atr', 'ATR0829G142' => 'atr', 'Atru.chr1.1054' => 'acertr', 'Atru.chr1.3875' => 'acertr', 'Atru.chr1.3899' => 'acertr', 'Atru.chr10.852' => 'acertr', 'Atru.chr11.2622' => 'acertr', 'Atru.chr3.2710' => 'acertr', 'Atru.chr7.1659' => 'acertr', 'Atru.chr8.1326' => 'acertr', 'AUR62000125' => 'cqu', 'AUR62001502' => 'cqu', 'AUR62009388' => 'cqu', 'AUR62009868' => 'cqu', 'AUR62019306' => 'cqu', 'AUR62023070' => 'cqu', 'AUR62024413' => 'cqu', 'AUR62025174' => 'cqu', 'AUR62029002' => 'cqu', 'AUR62034165' => 'cqu', 'AUR62034487' => 'cqu', 'BcaB01g05399' => 'bca', 'BcaB02g10858' => 'bca', 'BcaB03g14484' => 'bca', 'BcaB04g17019' => 'bca', 'BcaB04g19243' => 'bca', 'BcaB04g20619' => 'bca', 'BcaB04g21432' => 'bca', 'BcaB04g21433' => 'bca', 'BcaB05g24780' => 'bca', 'BcaB06g26166' => 'bca', 'BcaB06g26168' => 'bca', 'BcaB07g32661' => 'bca', 'BcaB07g32685' => 'bca', 'BcaB07g33255' => 'bca', 'BcaB08g37011' => 'bca', 'BcaB08g37015' => 'bca', 'BcaC01g01439' => 'bca', 'BcaC01g03533' => 'bca', 'BcaC01g05779' => 'bca', 'BcaC02g11550' => 'bca', 'BcaC03g15423' => 'bca', 'BcaC04g19177' => 'bca', 'BcaC05g28204' => 'bca', 'BcaC05g30096' => 'bca', 'BcaC06g32567' => 'bca', 'BcaC07g41372' => 'bca', 'BcaC08g43596' => 'bca', 'BcaC08g45694' => 'bca', 'BcaC08g46721' => 'bca', 'BcaC08g46723' => 'bca', 'BcaC09g47842' => 'bca', 'BcaNung01190' => 'bca', 'BcaNung03609' => 'bca', 'BcaNung04850' => 'bca', 'BcaNung04852' => 'bca', 'BcaNung04892' => 'bca', 'BcaNung05837' => 'bca', 'BcaNung05839' => 'bca', 'BcaNung06451' => 'bca', 'BolC1t05005H' => 'bol', 'BolC1t05678H' => 'bol', 'BolC2t06521H' => 'bol', 'BolC2t09084H' => 'bol', 'BolC3t13167H' => 'bol', 'BolC3t16452H' => 'bol', 'BolC3t17424H' => 'bol', 'BolC3t21522H' => 'bol', 'BolC4t22992H' => 'bol', 'BolC5t31680H' => 'bol', 'BolC5t33044H' => 'bol', 'BolC5t34811H' => 'bol', 'BolC6t36067H' => 'bol', 'BolC6t36755H' => 'bol', 'BolC6t39749H' => 'bol', 'BolC6t39751H' => 'bol', 'BolC8t51925H' => 'bol', 'BolC9t59270H' => 'bol', 'BolC9t59771H' => 'bol', 'BraA01t04000Z' => 'bra', 'BraA01t04487Z' => 'bra', 'BraA02t05134Z' => 'bra', 'BraA02t06869Z' => 'bra', 'BraA03t09905Z' => 'bra', 'BraA03t12602Z' => 'bra', 'BraA03t13350Z' => 'bra', 'BraA05t20036Z' => 'bra', 'BraA05t20664Z' => 'bra', 'BraA05t21667Z' => 'bra', 'BraA06t23265Z' => 'bra', 'BraA07t31448Z' => 'bra', 'BraA08t32168Z' => 'bra', 'BraA09t39120Z' => 'bra', 'BraA09t41400Z' => 'bra', 'BraA10t44594Z' => 'bra', 'BraA10t45029Z' => 'bra', 'C01p50540' => 'bna', 'C02p05760' => 'bna', 'C02p30350' => 'bna', 'C03p06610' => 'bna', 'C03p41720' => 'bna', 'C03p51380' => 'bna', 'C03p92040' => 'bna', 'C04p14020' => 'bna', 'C04p38890' => 'bna', 'C05p29500' => 'bna', 'C05p43140' => 'bna', 'C05p61530' => 'bna', 'C06p09940' => 'bna', 'C06p34630' => 'bna', 'C06p47090' => 'bna', 'C06p47110' => 'bna', 'C08p43770' => 'bna', 'C09p70270' => 'bna', 'CAN.G100.52' => 'can', 'CAN.G1439.5' => 'can', 'CAN.G1542.3' => 'can', 'CAN.G1576.6' => 'can', 'CAN.G1583.12' => 'can', 'CAN.G1594.1' => 'can', 'CAN.G219.6' => 'can', 'CAN.G390.20' => 'can', 'CAN.G494.5' => 'can', 'CAN.G547.11' => 'can', 'CAN.G6.11' => 'can', 'CAN.G641.15' => 'can', 'CAN.G674.7' => 'can', 'CAN.G79.39' => 'can', 'CAN.G821.12' => 'can', 'CAN.G862.24' => 'can', 'CAN.G911.38' => 'can', 'CANSAT35G0682' => 'cansat', 'CANSAT56G3072' => 'cansat', 'CANSAT56G3172' => 'cansat', 'CANSAT64G0754' => 'cansat', 'CANSAT80G1101' => 'cansat', 'CANSAT80G1700' => 'cansat', 'CARHR018190' => 'chi', 'CARHR029910' => 'chi', 'CARHR044510' => 'chi', 'CARHR065750' => 'chi', 'CARHR080140' => 'chi', 'CARHR088830' => 'chi', 'CARHR096790' => 'chi', 'CARHR128880' => 'chi', 'CARHR200610' => 'chi', 'CARHR206680' => 'chi', 'Carub.0001s2872' => 'cru', 'Carub.0001s4340' => 'cru', 'Carub.0002s1967' => 'cru', 'Carub.0003s0503' => 'cru', 'Carub.0003s1360' => 'cru', 'Carub.0003s2089' => 'cru', 'Carub.0004s1641' => 'cru', 'Carub.0006s0540' => 'cru', 'Carub.0006s1103' => 'cru', 'Ca_00840_v3' => 'car', 'Ca_01231_v3' => 'car', 'Ca_05016_v3' => 'car', 'Ca_09065_v3' => 'car', 'Ca_11677_v3' => 'car', 'Ca_13148_v3' => 'car', 'Ca_14875_v3' => 'car', 'Ca_23891_v3' => 'car', 'CBR_g39040' => 'cbr', 'CBR_g39043' => 'cbr', 'Cc00_g07300' => 'ccan', 'Cc00_g19380' => 'ccan', 'Cc02_g28060' => 'ccan', 'Cc04_g01480' => 'ccan', 'Cc06_g06710' => 'ccan', 'Cc06_g16930' => 'ccan', 'Cc08_g01380' => 'ccan', 'Cc09_g08020' => 'ccan', 'CDE01G0408' => 'cde', 'CDE05G0398' => 'cde', 'CDE05G0836' => 'cde', 'CDE05G3107' => 'cde', 'CDE06G0388' => 'cde', 'CDE11G0745' => 'cde', 'CDE12G0500' => 'cde', 'Cfa000820' => 'cfa', 'Cfa003034' => 'cfa', 'Cfa010770' => 'cfa', 'Cfa016844' => 'cfa', 'Cfa020052' => 'cfa', 'Ciclev10005144m.g' => 'ccl', 'Ciclev10012232m.g' => 'ccl', 'Ciclev10015808m.g' => 'ccl', 'Ciclev10016491m.g' => 'ccl', 'Ciclev10026020m.g' => 'ccl', 'Ciclev10032207m.g' => 'ccl', 'CiPaw.01G221100' => 'cil', 'CiPaw.02G137100' => 'cil', 'CiPaw.03G210300' => 'cil', 'CiPaw.04G146300' => 'cil', 'CiPaw.09G021800' => 'cil', 'CiPaw.09G115300' => 'cil', 'CiPaw.10G019000' => 'cil', 'CiPaw.10G031800' => 'cil', 'CiPaw.10G085600' => 'cil', 'CiPaw.13G160600' => 'cil', 'CiPaw.14G000300' => 'cil', 'CiPaw.14G118700' => 'cil', 'ClCG01G025130' => 'cla', 'ClCG02G023180' => 'cla', 'ClCG03G013220' => 'cla', 'ClCG04G000250' => 'cla', 'ClCG06G005730' => 'cla', 'ClCG09G004120' => 'cla', 'ClCG10G018210' => 'cla', 'ClCG11G001580' => 'cla', 'COL.COLO4_04857' => 'col', 'COL.COLO4_07580' => 'col', 'COL.COLO4_18138' => 'col', 'COL.COLO4_26832' => 'col', 'COL.COLO4_28203' => 'col', 'COL.COLO4_29540' => 'col', 'COL.COLO4_30783' => 'col', 'Cpa.g.sc104.9' => 'cpa', 'Cpa.g.sc125.6' => 'cpa', 'Cpa.g.sc20.45' => 'cpa', 'Cpa.g.sc20.47' => 'cpa', 'Cpa.g.sc25.96' => 'cpa', 'Cpa.g.sc84.49' => 'cpa', 'Cpa.g.sc84.50' => 'cpa', 'CsaV3_1G042800' => 'csa', 'CsaV3_3G038100' => 'csa', 'CsaV3_4G011610' => 'csa', 'CsaV3_6G039350' => 'csa', 'CsaV3_6G052320' => 'csa', 'CsaV3_7G031020' => 'csa', 'CSS0000821' => 'camsi', 'CSS0003673' => 'camsi', 'CSS0004932' => 'camsi', 'CSS0005613' => 'camsi', 'CSS0006496' => 'camsi', 'CSS0020271' => 'camsi', 'CSS0023816' => 'camsi', 'CSS0028045' => 'camsi', 'CSS0032804' => 'camsi', 'CSS0034010' => 'camsi', 'CSS0035200' => 'camsi', 'CSS0035499' => 'camsi', 'CSS0042225' => 'camsi', 'CSS0042484' => 'camsi', 'CSS0044548' => 'camsi', 'DCAR_002074' => 'dca', 'DCAR_003855' => 'dca', 'DCAR_007632' => 'dca', 'DCAR_013444' => 'dca', 'DCAR_020690' => 'dca', 'DCAR_022391' => 'dca', 'DCAR_026393' => 'dca', 'DCAR_028285' => 'dca', 'DCAR_031537' => 'dca', 'Dinv02185' => 'din', 'Dinv04022' => 'din', 'Dinv06447' => 'din', 'Dinv06449' => 'din', 'Dinv09351' => 'din', 'Dinv12351' => 'din', 'Dinv18067' => 'din', 'Dinv22175' => 'din', 'Dinv25584' => 'din', 'Dinv31776' => 'din', 'Dinv37878' => 'din', 'Dinv42365' => 'din', 'Dinv43440' => 'din', 'Duzib093G1267' => 'dzi', 'Duzib106G0482' => 'dzi', 'Duzib128G0095' => 'dzi', 'Duzib128G1874' => 'dzi', 'Duzib133G0283' => 'dzi', 'Duzib138G1104' => 'dzi', 'Duzib150G0130' => 'dzi', 'Duzib150G0566' => 'dzi', 'Duzib160G0010' => 'dzi', 'Duzib160G0266' => 'dzi', 'Duzib168G0742' => 'dzi', 'Duzib168G0819' => 'dzi', 'Duzib170G0603' => 'dzi', 'Duzib187G0423' => 'dzi', 'Duzib192G0141' => 'dzi', 'Duzib235G0161' => 'dzi', 'Duzib235G0383' => 'dzi', 'ECA233G1418' => 'eca', 'ECA234G4119' => 'eca', 'ECA238G1010' => 'eca', 'ECA240G0472' => 'eca', 'ECA247G3873' => 'eca', 'EL10Ac2g04334' => 'bvu', 'EL10Ac3g07033' => 'bvu', 'EL10Ac4g08724' => 'bvu', 'EL10Ac4g10245' => 'bvu', 'EL10Ac7g16393' => 'bvu', 'EL10Ac8g19140' => 'bvu', 'Eucgr.A02381' => 'egr', 'Eucgr.A02570' => 'egr', 'Eucgr.C00842' => 'egr', 'Eucgr.F03169' => 'egr', 'Eucgr.G03377' => 'egr', 'Eucgr.J00764' => 'egr', 'Eucgr.K01921' => 'egr', 'Eucgr.K01943' => 'egr', 'FAN01G0595' => 'fan', 'FAN01G2828' => 'fan', 'FAN02G0738' => 'fan', 'FAN02G2962' => 'fan', 'FAN03G3292' => 'fan', 'FAN05G1196' => 'fan', 'FAN05G4911' => 'fan', 'FAN05G5580' => 'fan', 'FAN06G4835' => 'fan', 'FAN09G3653' => 'fan', 'FAN09G4692' => 'fan', 'FAN10G3954' => 'fan', 'FAN11G2485' => 'fan', 'FAN11G3044' => 'fan', 'FAN14G4097' => 'fan', 'FAN14G5643' => 'fan', 'FAN16G0836' => 'fan', 'FAN16G2500' => 'fan', 'FAN19G1174' => 'fan', 'FAN21G0804' => 'fan', 'FAN21G0818' => 'fan', 'FAN23G1897' => 'fan', 'FAN25G1345' => 'fan', 'FAN25G3527' => 'fan', 'FAN26G0115' => 'fan', 'FAN26G0698' => 'fan', 'FAN28G2443' => 'fan', 'FvH4_1g08160' => 'fve', 'FvH4_3g10080' => 'fve', 'FvH4_3g28780' => 'fve', 'FvH4_6g20510' => 'fve', 'FvH4_6g34360' => 'fve', 'FvH4_7g01120' => 'fve', 'Glyma.02G195000' => 'gma', 'Glyma.02G303800' => 'gma', 'Glyma.03G203000' => 'gma', 'Glyma.05G166100' => 'gma', 'Glyma.07G036200' => 'gma', 'Glyma.08G124200' => 'gma', 'Glyma.08G335900' => 'gma', 'Glyma.09G023800' => 'gma', 'Glyma.09G068400' => 'gma', 'Glyma.10G082800' => 'gma', 'Glyma.12G236800' => 'gma', 'Glyma.13G107900' => 'gma', 'Glyma.13G202300' => 'gma', 'Glyma.14G010000' => 'gma', 'Glyma.15G027400' => 'gma', 'Glyma.15G129900' => 'gma', 'Glyma.15G173300' => 'gma', 'Glyma.16G005500' => 'gma', 'Glyma.17G051400' => 'gma', 'Glyma.18G071000' => 'gma', 'Glyma.19G200800' => 'gma', 'Gohir.A01G134000' => 'ghi', 'Gohir.A01G200600' => 'ghi', 'Gohir.A02G107105' => 'ghi', 'Gohir.A04G055233' => 'ghi', 'Gohir.A05G110300' => 'ghi', 'Gohir.A05G137400' => 'ghi', 'Gohir.A05G406500' => 'ghi', 'Gohir.A06G075000' => 'ghi', 'Gohir.A07G013700' => 'ghi', 'Gohir.A08G054200' => 'ghi', 'Gohir.A08G144100' => 'ghi', 'Gohir.A10G004000' => 'ghi', 'Gohir.A10G052400' => 'ghi', 'Gohir.A11G315666' => 'ghi', 'Gohir.A13G192100' => 'ghi', 'Gohir.A13G216700' => 'ghi', 'Gohir.D01G121300' => 'ghi', 'Gohir.D01G190600' => 'ghi', 'Gohir.D03G067300' => 'ghi', 'Gohir.D04G009100' => 'ghi', 'Gohir.D04G092200' => 'ghi', 'Gohir.D04G092316' => 'ghi', 'Gohir.D05G110600' => 'ghi', 'Gohir.D05G139400' => 'ghi', 'Gohir.D06G073800' => 'ghi', 'Gohir.D07G013500' => 'ghi', 'Gohir.D08G165100' => 'ghi', 'Gohir.D09G129550' => 'ghi', 'Gohir.D10G004000' => 'ghi', 'Gohir.D10G054100' => 'ghi', 'Gohir.D11G332800' => 'ghi', 'Gohir.D13G197500' => 'ghi', 'Gohir.D13G220300' => 'ghi', 'Gorai.001G014200' => 'gra', 'Gorai.002G151800' => 'gra', 'Gorai.002G234400' => 'gra', 'Gorai.003G093300' => 'gra', 'Gorai.004G066000' => 'gra', 'Gorai.004G172100' => 'gra', 'Gorai.006G148400' => 'gra', 'Gorai.007G363800' => 'gra', 'Gorai.009G115000' => 'gra', 'Gorai.009G143800' => 'gra', 'Gorai.009G394400' => 'gra', 'Gorai.010G086300' => 'gra', 'Gorai.011G004400' => 'gra', 'Gorai.011G057600' => 'gra', 'Gorai.012G010900' => 'gra', 'Gorai.013G226200' => 'gra', 'Gorai.013G251200' => 'gra', 'GSVIVG01015120001' => 'vvi', 'GSVIVG01016790001' => 'vvi', 'GSVIVG01021622001' => 'vvi', 'GSVIVG01022601001' => 'vvi', 'GSVIVG01025252001' => 'vvi', 'GSVIVG01032101001' => 'vvi', 'GSVIVG01033313001' => 'vvi', 'HanXRQChr01g0007571' => 'han', 'HanXRQChr02g0053291' => 'han', 'HanXRQChr02g0056021' => 'han', 'HanXRQChr04g0094841' => 'han', 'HanXRQChr05g0132591' => 'han', 'HanXRQChr07g0197441' => 'han', 'HanXRQChr11g0341251' => 'han', 'HanXRQChr13g0398511' => 'han', 'HanXRQChr13g0402221' => 'han', 'HanXRQChr14g0453021' => 'han', 'HanXRQChr17g0553811' => 'han', 'HanXRQChr17g0562971' => 'han', 'Haze_03201' => 'cav', 'Haze_05819' => 'cav', 'Haze_19897' => 'cav', 'Haze_20145' => 'cav', 'Haze_20147' => 'cav', 'Haze_23142' => 'cav', 'Hma1.2p1_0002F.1_g002240' => 'hma', 'Hma1.2p1_0027F.1_g017100' => 'hma', 'Hma1.2p1_0027F.1_g017110' => 'hma', 'Hma1.2p1_0064F.1_g034580' => 'hma', 'Hma1.2p1_0184F.1_g081170' => 'hma', 'Hma1.2p1_0285F.1_g113920' => 'hma', 'Hma1.2p1_0291F.1_g115250' => 'hma', 'HPP92_006148' => 'vpl', 'HPP92_012161' => 'vpl', 'HPP92_012162' => 'vpl', 'HPP92_013941' => 'vpl', 'HPP92_016573' => 'vpl', 'HPP92_024341' => 'vpl', 'HPP92_024783' => 'vpl', 'HPP92_024876' => 'vpl', 'Hund05748' => 'sun', 'Hund06809' => 'sun', 'Hund07505' => 'sun', 'Hund14181' => 'sun', 'Hund19161' => 'sun', 'Hund22028' => 'sun', 'Hund24727' => 'sun', 'Lalb_Chr00c44g0412651' => 'lal', 'Lalb_Chr00c44g0412661' => 'lal', 'Lalb_Chr01g0017821' => 'lal', 'Lalb_Chr02g0154391' => 'lal', 'Lalb_Chr02g0154401' => 'lal', 'Lalb_Chr03g0034101' => 'lal', 'Lalb_Chr04g0263331' => 'lal', 'Lalb_Chr06g0172671' => 'lal', 'Lalb_Chr06g0172681' => 'lal', 'Lalb_Chr08g0232481' => 'lal', 'Lalb_Chr11g0074351' => 'lal', 'Lalb_Chr12g0200021' => 'lal', 'Lalb_Chr13g0295531' => 'lal', 'Lalb_Chr15g0082541' => 'lal', 'Lalb_Chr18g0050461' => 'lal', 'Lalb_Chr20g0115211' => 'lal', 'Lalb_Chr20g0120051' => 'lal', 'Lalb_Chr25g0287931' => 'lal', 'Lj1A1056T49' => 'lonja', 'Lj1g0023770' => 'lja', 'Lj2C330T5' => 'lonja', 'Lj3g0016238' => 'lja', 'Lj3g0019233' => 'lja', 'Lj4g0014340' => 'lja', 'Lj4g0022318' => 'lja', 'Lj5C39T4' => 'lonja', 'Lj5g0007773' => 'lja', 'Lj6g0002522' => 'lja', 'Lj6g0026286' => 'lja', 'Lj7A571T38' => 'lonja', 'Lj7C682T15' => 'lonja', 'LjContig00081g0010953' => 'lja', 'Lsat_1_v5_gn_1_117081' => 'lsa', 'Lsat_1_v5_gn_1_37160' => 'lsa', 'Lsat_1_v5_gn_2_54241' => 'lsa', 'Lsat_1_v5_gn_2_97800' => 'lsa', 'Lsat_1_v5_gn_4_31560' => 'lsa', 'Lsat_1_v5_gn_6_34921' => 'lsa', 'Lsat_1_v5_gn_6_47121' => 'lsa', 'Lsat_1_v5_gn_7_34841' => 'lsa', 'Manes.04G142600' => 'mes', 'Manes.06G054900' => 'mes', 'Manes.06G163900' => 'mes', 'Manes.07G006600' => 'mes', 'Manes.08G034700' => 'mes', 'Manes.09G025200' => 'mes', 'Manes.09G044200' => 'mes', 'Manes.10G141400' => 'mes', 'Manes.11G022300' => 'mes', 'Manes.14G003100' => 'mes', 'Manes.14G123000' => 'mes', 'Manes.16G097900' => 'mes', 'Mapoly0019s0144' => 'mpo', 'MBI02_g20546_MAGBIO' => 'mbi', 'MBI04_g36078_MAGBIO' => 'mbi', 'MBI11_g15176_MAGBIO' => 'mbi', 'MBI13_g29629_MAGBIO' => 'mbi', 'MBI18_g10577_MAGBIO' => 'mbi', 'MBI19_g17444_MAGBIO' => 'mbi', 'MCO12G076' => 'mco', 'MD02G1086200' => 'mdo', 'MD02G1309800' => 'mdo', 'MD03G1174600' => 'mdo', 'MD05G1273300' => 'mdo', 'MD07G1011300' => 'mdo', 'MD09G1186200' => 'mdo', 'MD10G1253300' => 'mdo', 'MD11G1192400' => 'mdo', 'MD12G1042100' => 'mdo', 'MD14G1041300' => 'mdo', 'MD15G1213400' => 'mdo', 'Medtr1g056530' => 'mtr', 'Medtr2g030170' => 'mtr', 'Medtr2g041090' => 'mtr', 'Medtr2g099490' => 'mtr', 'Medtr3g061510' => 'mtr', 'Medtr7g106450' => 'mtr', 'Medtr8g019540' => 'mtr', 'Medtr8g037270' => 'mtr', 'MELO3C007077.2' => 'cme', 'MELO3C009551.2' => 'cme', 'MELO3C014590.2' => 'cme', 'MELO3C015196.2' => 'cme', 'MELO3C023161.2' => 'cme', 'MELO3C023554.2' => 'cme', 'Migut.D00604' => 'egut', 'Migut.E01576' => 'egut', 'Migut.J00688' => 'egut', 'Migut.J00955' => 'egut', 'Migut.L01823' => 'egut', 'Migut.M01893' => 'egut', 'Migut.N01603' => 'egut', 'Migut.N02320' => 'egut', 'MSTRG.12467' => 'ama', 'MSTRG.16289' => 'ama', 'MSTRG.1689' => 'ama', 'MSTRG.18429' => 'ama', 'MSTRG.19299' => 'ama', 'MSTRG.19481' => 'ama', 'MSTRG.19876' => 'ama', 'MSTRG.21375' => 'ama', 'MSTRG.22555' => 'ama', 'MSTRG.28064' => 'ama', 'MSTRG.5888' => 'ama', 'Nitab4.5_0000023g0710' => 'nta', 'Nitab4.5_0000073g0050' => 'nta', 'Nitab4.5_0000082g0020' => 'nta', 'Nitab4.5_0000189g0260' => 'nta', 'Nitab4.5_0000220g0150' => 'nta', 'Nitab4.5_0000549g0010' => 'nta', 'Nitab4.5_0000608g0070' => 'nta', 'Nitab4.5_0001225g0060' => 'nta', 'Nitab4.5_0001587g0040' => 'nta', 'Nitab4.5_0002165g0020' => 'nta', 'Nitab4.5_0002177g0160' => 'nta', 'Nitab4.5_0002642g0010' => 'nta', 'Nitab4.5_0002741g0160' => 'nta', 'Nitab4.5_0002786g0010' => 'nta', 'Nitab4.5_0002842g0120' => 'nta', 'Nitab4.5_0002879g0030' => 'nta', 'Nitab4.5_0003874g0020' => 'nta', 'Nitab4.5_0004615g0080' => 'nta', 'Nitab4.5_0005257g0040' => 'nta', 'Nitab4.5_0005476g0020' => 'nta', 'Nitab4.5_0006017g0030' => 'nta', 'Nitab4.5_0006105g0020' => 'nta', 'Nitab4.5_0007165g0020' => 'nta', 'Nitab4.5_0008405g0020' => 'nta', 'Nitab4.5_0009913g0010' => 'nta', 'Nn2g14352' => 'nnu', 'Nn2g15356' => 'nnu', 'Nn3g20230' => 'nnu', 'Nn6g34632' => 'nnu', 'Nn6g35581' => 'nnu', 'Nn7g36222' => 'nnu', 'Nn8g38730' => 'nnu', 'Oeu006565.1' => 'oeu', 'Oeu007213.3' => 'oeu', 'Oeu008093.1' => 'oeu', 'Oeu008954.1' => 'oeu', 'Oeu010819.1' => 'oeu', 'Oeu014588.1' => 'oeu', 'Oeu015662.1' => 'oeu', 'Oeu015663.1' => 'oeu', 'Oeu016681.2' => 'oeu', 'Oeu020607.1' => 'oeu', 'Oeu025871.1' => 'oeu', 'Oeu027278.3' => 'oeu', 'Oeu033155.2' => 'oeu', 'Oeu040084.1' => 'oeu', 'Oeu047511.1' => 'oeu', 'Oeu049500.1' => 'oeu', 'Oeu051317.2' => 'oeu', 'Oeu060305.1' => 'oeu', 'Oeu063324.1' => 'oeu', 'Os02g0776400' => 'osa', 'Os03g0174900' => 'osa', 'Os03g0411100' => 'osa', 'Os03g0647600' => 'osa', 'Os03g0696300' => 'osa', 'Os07g0158500' => 'osa', 'Os07g0608200' => 'osa', 'Os08g0196700' => 'osa', 'Os10g0397900' => 'osa', 'Os12g0613000' => 'osa', 'Os12g0618600' => 'osa', 'Peaxi162Scf00003g04130' => 'pax', 'Peaxi162Scf00004g02521' => 'pax', 'Peaxi162Scf00032g00323' => 'pax', 'Peaxi162Scf00038g01819' => 'pax', 'Peaxi162Scf00211g00239' => 'pax', 'Peaxi162Scf00267g00038' => 'pax', 'Peaxi162Scf00339g00512' => 'pax', 'Peaxi162Scf00498g00617' => 'pax', 'Peaxi162Scf00809g00019' => 'pax', 'Peaxi162Scf00953g00217' => 'pax', 'PGR004G2767' => 'pgr', 'PGR031G3862' => 'pgr', 'PGR031G3921' => 'pgr', 'PGR119G0208' => 'pgr', 'PGR119G0546' => 'pgr', 'PGR142G2908' => 'pgr', 'PGR142G3433' => 'pgr', 'PGSC0003DMG400000272' => 'stu', 'PGSC0003DMG400002484' => 'stu', 'PGSC0003DMG400006863' => 'stu', 'PGSC0003DMG400007350' => 'stu', 'PGSC0003DMG400008148' => 'stu', 'PGSC0003DMG400010697' => 'stu', 'PGSC0003DMG400011806' => 'stu', 'PGSC0003DMG400021365' => 'stu', 'PGSC0003DMG400021747' => 'stu', 'PGSC0003DMG400028144' => 'stu', 'PGSC0003DMG401021124' => 'stu', 'Phvul.001G196800' => 'pvu', 'Phvul.002G246600' => 'pvu', 'Phvul.003G133100' => 'pvu', 'Phvul.005G156100' => 'pvu', 'Phvul.006G062200' => 'pvu', 'Phvul.007G267100' => 'pvu', 'Phvul.008G283100' => 'pvu', 'Phvul.010G133300' => 'pvu', 'Phvul.011G211300' => 'pvu', 'Potri.001G257600' => 'ptr', 'Potri.001G266000' => 'ptr', 'Potri.001G372100' => 'ptr', 'Potri.006G053500' => 'ptr', 'Potri.006G145100' => 'ptr', 'Potri.006G201900' => 'ptr', 'Potri.009G052900' => 'ptr', 'Potri.009G060600' => 'ptr', 'Potri.011G098400' => 'ptr', 'Potri.016G068200' => 'ptr', 'Potri.018G064700' => 'ptr', 'Pp3c11_21360' => 'ppa', 'Pp3c7_7470' => 'ppa', 'Prupe.2G014500' => 'ppe', 'Prupe.3G043900' => 'ppe', 'Prupe.4G090200' => 'ppe', 'Prupe.4G249900' => 'ppe', 'Prupe.7G093100' => 'ppe', 'Prupe.7G203500' => 'ppe', 'Psat0s1333g0120' => 'psa', 'Psat1g132840' => 'psa', 'Psat1g167640' => 'psa', 'Psat3g028240' => 'psa', 'Psat4g148880' => 'psa', 'Psat4g183600' => 'psa', 'Psat5g165120' => 'psa', 'Psat5g291000' => 'psa', 'Psat6g092920' => 'psa', 'PSO063G1663' => 'pso', 'PSO210G1397' => 'pso', 'PSO210G7033' => 'pso', 'PSO339G1099' => 'pso', 'PSO339G4525' => 'pso', 'PSO339G6462' => 'pso', 'PSO384G1155' => 'pso', 'PSO384G2356' => 'pso', 'PSO384G2869' => 'pso', 'PSO421G0626' => 'pso', 'PSO675G1193' => 'pso', 'PSO675G7064' => 'pso', 'QL01p004648' => 'qlo', 'QL02p061158' => 'qlo', 'QL02p061167' => 'qlo', 'QL02p061202' => 'qlo', 'QL02p061207' => 'qlo', 'QL02p061234' => 'qlo', 'QL04p006303' => 'qlo', 'QL05p008693' => 'qlo', 'QL05p061832' => 'qlo', 'QL07p027452' => 'qlo', 'RcHm_v2.0_Chr1g0316121' => 'rch', 'RcHm_v2.0_Chr1g0316201' => 'rch', 'RcHm_v2.0_Chr2g0094231' => 'rch', 'RcHm_v2.0_Chr2g0144701' => 'rch', 'RcHm_v2.0_Chr3g0476401' => 'rch', 'RcHm_v2.0_Chr5g0015971' => 'rch', 'RcHm_v2.0_Chr5g0052231' => 'rch', 'Rhsim01G0192000' => 'rsi', 'Rhsim02G0161300' => 'rsi', 'Rhsim03G0063600' => 'rsi', 'Rhsim03G0230500' => 'rsi', 'Rhsim07G0056100' => 'rsi', 'Rhsim08G0237000' => 'rsi', 'Rhsim12G0208700' => 'rsi', 'Rhsim13G0120500' => 'rsi', 'Rhsim13G0220900' => 'rsi', 'Sabra06G0037900' => 'sbr', 'Sabra06G0114700' => 'sbr', 'Sabra06G0155300' => 'sbr', 'Sabra09G0038600' => 'sbr', 'Sabra09G0044700' => 'sbr', 'Sabra11G0084400' => 'sbr', 'Sabra16G0163200' => 'sbr', 'Sabra16G0244600' => 'sbr', 'Sabra18G0057300' => 'sbr', 'SalBow1G4766' => 'sbo', 'SalBow5G3043' => 'sbo', 'SalBow5G4792' => 'sbo', 'SalBow6G1339' => 'sbo', 'SalBow6G1565' => 'sbo', 'SalBow6G4778' => 'sbo', 'SalBow6G6188' => 'sbo', 'Sc08g0008730' => 'sci', 'Sc09g0000740' => 'sci', 'Sc10g0000100' => 'sci', 'Sc11g0009150' => 'sci', 'Sc17g0004640' => 'sci', 'Sc18g0002380' => 'sci', 'Sc20g0001090' => 'sci', 'Sed0000093' => 'sed', 'Sed0001584' => 'sed', 'Sed0014370' => 'sed', 'Sed0015811' => 'sed', 'Sed0016559' => 'sed', 'Sed0018166' => 'sed', 'Sed0019798' => 'sed', 'Sed0020104' => 'sed', 'Sed0021450' => 'sed', 'Sed0024393' => 'sed', 'SEGI_00490' => 'sgi', 'SEGI_00848' => 'sgi', 'SEGI_07659' => 'sgi', 'SEGI_07685' => 'sgi', 'SEGI_08249' => 'sgi', 'SEGI_36150' => 'sgi', 'SGA_v2.0_scaffold142G35698' => 'sas', 'SGA_v2.0_scaffold163G38006' => 'sas', 'SGA_v2.0_scaffold169G38711' => 'sas', 'SGA_v2.0_scaffold20G09012' => 'sas', 'SGA_v2.0_scaffold223G42864' => 'sas', 'SGA_v2.0_scaffold247G44882' => 'sas', 'SGA_v2.0_scaffold35G14019' => 'sas', 'SGA_v2.0_scaffold3G01499' => 'sas', 'SGA_v2.0_scaffold3G01501' => 'sas', 'SGA_v2.0_scaffold540G52807' => 'sas', 'SGA_v2.0_scaffold81G26001' => 'sas', 'SGA_v2.0_scaffold91G28073' => 'sas', 'SGA_v2.0_scaffold97G29152' => 'sas', 'SHI29789' => 'shi', 'SMO361G0815' => 'smo', 'Solyc01g006930.3' => 'sly', 'Solyc01g008490.4' => 'sly', 'Solyc01g087240.3' => 'sly', 'Solyc02g069860.4' => 'sly', 'Solyc03g121940.3' => 'sly', 'Solyc08g062210.3' => 'sly', 'Solyc10g079150.3' => 'sly', 'Solyc10g081840.3' => 'sly', 'Solyc11g065700.2' => 'sly', 'Solyc12g009050.3' => 'sly', 'Sopen01g002920' => 'spe', 'Sopen01g004020' => 'spe', 'Sopen01g034290' => 'spe', 'Sopen02g019020' => 'spe', 'Sopen03g040760' => 'spe', 'Sopen08g017820' => 'spe', 'Sopen10g029800' => 'spe', 'Sopen10g032360' => 'spe', 'Sopen11g025440' => 'spe', 'Sopen12g003980' => 'spe', 'Sp1g15720' => 'spa', 'Sp1g26340' => 'spa', 'Sp1g40610' => 'spa', 'Sp3g04570' => 'spa', 'Sp3g12270' => 'spa', 'Sp3g18940' => 'spa', 'Sp4g17000' => 'spa', 'Sp5g27870' => 'spa', 'Sp6g31110' => 'spa', 'Sp6g36350' => 'spa', 'TAR369G0405' => 'tar', 'TAR369G0774' => 'tar', 'TAR383G0575' => 'tar', 'TAR623G1120' => 'tar', 'TAR624G0895' => 'tar', 'TAR626G0327' => 'tar', 'TAR626G0411' => 'tar', 'TAR627G0141' => 'tar', 'TAR633G2183' => 'tar', 'TAR633G2356' => 'tar', 'TAR636G0164' => 'tar', 'TAR636G3070' => 'tar', 'THA.LOC104798601' => 'tha', 'THA.LOC104799107' => 'tha', 'THA.LOC104799377' => 'tha', 'THA.LOC104811169' => 'tha', 'THA.LOC104813949' => 'tha', 'THA.LOC104815623' => 'tha', 'THA.LOC104816637' => 'tha', 'THA.LOC104816879' => 'tha', 'THA.LOC104822660' => 'tha', 'THA.LOC104824617' => 'tha', 'THA.LOC104826680' => 'tha', 'THA.LOC104826789' => 'tha', 'Thecc.01G410300' => 'tca', 'Thecc.05G106600' => 'tca', 'Thecc.05G159600' => 'tca', 'Thecc.06G001700' => 'tca', 'Thecc.06G117600' => 'tca', 'Thecc.09G081400' => 'tca', 'Thecc.09G234400' => 'tca', 'Thhalv10009032m.g' => 'esa', 'Thhalv10009414m.g' => 'esa', 'Thhalv10011685m.g' => 'esa', 'Thhalv10014346m.g' => 'esa', 'Thhalv10014364m.g' => 'esa', 'Thhalv10017261m.g' => 'esa', 'Thhalv10018869m.g' => 'esa', 'Thhalv10021240m.g' => 'esa', 'Thhalv10021244m.g' => 'esa', 'Thhalv10021250m.g' => 'esa', 'TPR.G14728' => 'tpr', 'TPR.G16443' => 'tpr', 'TPR.G1852' => 'tpr', 'TPR.G25328' => 'tpr', 'TPR.G25336' => 'tpr', 'TPR.G26363' => 'tpr', 'TPR.G31294' => 'tpr', 'TPR.G31544' => 'tpr', 'TPR.G6525' => 'tpr', 'TWI09G1462' => 'twi', 'TWI32G0309' => 'twi', 'TWI34G0738' => 'twi', 'TWI34G1873' => 'twi', 'TWI53G1094' => 'twi', 'TWI53G1882' => 'twi', 'TWI60G0977' => 'twi', 'TWI63G1580' => 'twi', 'TWI73G0113' => 'twi', 'TWI73G0751' => 'twi', 'TWI74G0836' => 'twi', 'TWI74G0878' => 'twi', 'TWI79G1736' => 'twi', 'unitig_0.g297' => 'ugi', 'unitig_699.g19423' => 'ugi', 'unitig_749.g14233' => 'ugi', 'unitig_90.g27473' => 'ugi', 'vmacro03390' => 'vma', 'vmacro03445' => 'vma', 'vmacro04154' => 'vma', 'vmacro06313' => 'vma', 'vmacro07488' => 'vma', 'vmacro10975' => 'vma', 'vmacro13670' => 'vma', 'vmacro17049' => 'vma', 'vmacro22214' => 'vma', 'VMungo0251G2498' => 'vmu', 'VMungo0331G1186' => 'vmu', 'VMungo0540G2022' => 'vmu', 'VMungo0647G1254' => 'vmu', 'VMungo1080G1205' => 'vmu', 'VMungo1127G1682' => 'vmu', 'VMungo1215G2700' => 'vmu', 'VMungo1383G0587' => 'vmu', 'Zm00001eb005690' => 'zma', 'Zm00001eb019780' => 'zma', 'Zm00001eb031690' => 'zma', 'Zm00001eb032000' => 'zma', 'Zm00001eb050320' => 'zma', 'Zm00001eb053830' => 'zma', 'Zm00001eb108930' => 'zma', 'Zm00001eb117450' => 'zma', 'Zm00001eb136080' => 'zma', 'Zm00001eb216950' => 'zma', 'Zm00001eb218610' => 'zma', 'Zm00001eb256650' => 'zma', 'Zm00001eb327230' => 'zma', 'Zm00001eb430970' => 'zma' ) $gf_id = 'HOM05D000545' $gf_types_information = array( 'HOMFAM' => array( 'id' => 'HOMFAM', 'name' => 'Homologous gene family', 'gene_type' => 'coding', 'parent_id' => '', 'ancestry' => 'homology' ), 'ORTHOFAM' => array( 'id' => 'ORTHOFAM', 'name' => 'Orthologous gene family', 'gene_type' => 'coding', 'parent_id' => 'HOMFAM', 'ancestry' => 'orthology' ) ) $gf_types_configuration = array( 'HOMFAM' => array( 'order' => '1', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ), 'ORTHOFAM' => array( 'order' => '2', 'show_parentless_subfamilies' => 'false', 'show_table' => 'true', 'show_orphan' => false ) ) $all_species = array( 'acertr' => array( 'species' => 'acertr', 'common_name' => 'Acer truncatum', 'tax_id' => '47965', 'version' => 'v2.0' ), 'ach' => array( 'species' => 'ach', 'common_name' => 'Actinidia chinensis', 'tax_id' => '3625', 'version' => 'V3.0' ), 'aar' => array( 'species' => 'aar', 'common_name' => 'Aethionema arabicum', 'tax_id' => '228871', 'version' => 'v3.1' ), 'amhyb' => array( 'species' => 'amhyb', 'common_name' => 'Amaranthus hybridus', 'tax_id' => '3565', 'version' => 'v1.0' ), 'atr' => array( 'species' => 'atr', 'common_name' => 'Amborella trichopoda', 'tax_id' => '13333', 'version' => 'JGI v1.0' ), 'aag' => array( 'species' => 'aag', 'common_name' => 'Anthoceros agrestis', 'tax_id' => '41834', 'version' => 'v1.1' ), 'aox' => array( 'species' => 'aox', 'common_name' => 'Aquilegia oxysepala', 'tax_id' => '432649', 'version' => 'v1.0' ), 'aly' => array( 'species' => 'aly', 'common_name' => 'Arabidopsis lyrata', 'tax_id' => '59689', 'version' => 'JGI v2.1' ), 'ath' => array( 'species' => 'ath', 'common_name' => 'Arabidopsis thaliana', 'tax_id' => '3702', 'version' => 'Araport11' ), 'arhy' => array( 'species' => 'arhy', 'common_name' => 'Arachis hypogaea', 'tax_id' => '3818', 'version' => 'v1.0' ), 'ama' => array( 'species' => 'ama', 'common_name' => 'Avicennia marina', 'tax_id' => '82927', 'version' => 'v1.1 20200527' ), 'bvu' => array( 'species' => 'bvu', 'common_name' => 'Beta vulgaris', 'tax_id' => '161934', 'version' => 'EL10_1.0' ), 'bca' => array( 'species' => 'bca', 'common_name' => 'Brassica carinata', 'tax_id' => '52824', 'version' => 'V1.0' ), 'bna' => array( 'species' => 'bna', 'common_name' => 'Brassica napus', 'tax_id' => '3708', 'version' => 'v2.0' ), 'bol' => array( 'species' => 'bol', 'common_name' => 'Brassica oleracea', 'tax_id' => '109376', 'version' => 'v1.0' ), 'bra' => array( 'species' => 'bra', 'common_name' => 'Brassica rapa', 'tax_id' => '3711', 'version' => 'v1.0' ), 'camsi' => array( 'species' => 'camsi', 'common_name' => 'Camellia sinensis var. sinensis', 'tax_id' => '542762', 'version' => 'CSS_ChrLev_20200506' ), 'cansat' => array( 'species' => 'cansat', 'common_name' => 'Cannabis sativa', 'tax_id' => '3483', 'version' => 'cs10' ), 'cru' => array( 'species' => 'cru', 'common_name' => 'Capsella rubella', 'tax_id' => '81985', 'version' => 'JGI v1.1' ), 'can' => array( 'species' => 'can', 'common_name' => 'Capsicum annuum', 'tax_id' => '4072', 'version' => 'Pepper Genome v2.0' ), 'chi' => array( 'species' => 'chi', 'common_name' => 'Cardamine hirsuta', 'tax_id' => '50463', 'version' => 'v1.0' ), 'cpa' => array( 'species' => 'cpa', 'common_name' => 'Carica papaya', 'tax_id' => '3649', 'version' => 'JGI ASGPB0.4' ), 'cfa' => array( 'species' => 'cfa', 'common_name' => 'Carpinus fangiana', 'tax_id' => '176857', 'version' => 'v1.0' ), 'cil' => array( 'species' => 'cil', 'common_name' => 'Carya illinoinensis', 'tax_id' => '32201', 'version' => 'v1.1' ), 'cde' => array( 'species' => 'cde', 'common_name' => 'Ceratophyllum demersum', 'tax_id' => '4428', 'version' => 'v1.0' ), 'cbr' => array( 'species' => 'cbr', 'common_name' => 'Chara braunii', 'tax_id' => '69332', 'version' => 'Cbr1.0' ), 'cqu' => array( 'species' => 'cqu', 'common_name' => 'Chenopodium quinoa', 'tax_id' => '63459', 'version' => 'KAUST v1.0' ), 'cre' => array( 'species' => 'cre', 'common_name' => 'Chlamydomonas reinhardtii', 'tax_id' => '3055', 'version' => 'JGI v5.5' ), 'car' => array( 'species' => 'car', 'common_name' => 'Cicer arietinum L.', 'tax_id' => '3827', 'version' => 'v3.0' ), 'cla' => array( 'species' => 'cla', 'common_name' => 'Citrullus lanatus', 'tax_id' => '3654', 'version' => 'WCG v2.0' ), 'ccl' => array( 'species' => 'ccl', 'common_name' => 'Citrus clementina', 'tax_id' => '85681', 'version' => 'JGI v1.0' ), 'ccan' => array( 'species' => 'ccan', 'common_name' => 'Coffea canephora', 'tax_id' => '49390', 'version' => 'Coffee Genome Hub v1' ), 'col' => array( 'species' => 'col', 'common_name' => 'Corchorus olitorius', 'tax_id' => '93759', 'version' => 'GenBank v1.0' ), 'cav' => array( 'species' => 'cav', 'common_name' => 'Corylus avellana', 'tax_id' => '13451', 'version' => 'v1.0' ), 'cme' => array( 'species' => 'cme', 'common_name' => 'Cucumis melo', 'tax_id' => '3656', 'version' => 'Melonomics v3.6.1' ), 'csa' => array( 'species' => 'csa', 'common_name' => 'Cucumis sativus L.', 'tax_id' => '3659', 'version' => 'v3.0' ), 'dca' => array( 'species' => 'dca', 'common_name' => 'Daucus carota', 'tax_id' => '4039', 'version' => 'JGI v2.0' ), 'din' => array( 'species' => 'din', 'common_name' => 'Davidia involucrata', 'tax_id' => '16924', 'version' => 'v1.0' ), 'dzi' => array( 'species' => 'dzi', 'common_name' => 'Durio zibethinus', 'tax_id' => '66656', 'version' => 'Duzib1.0' ), 'eca' => array( 'species' => 'eca', 'common_name' => 'Erigeron canadensis', 'tax_id' => '72917', 'version' => 'V1.0' ), 'egut' => array( 'species' => 'egut', 'common_name' => 'Erythranthe guttata', 'tax_id' => '4155', 'version' => 'v2.0' ), 'egr' => array( 'species' => 'egr', 'common_name' => 'Eucalyptus grandis', 'tax_id' => '71139', 'version' => 'v2.0' ), 'esa' => array( 'species' => 'esa', 'common_name' => 'Eutrema salsugineum', 'tax_id' => '72664', 'version' => 'v1.0' ), 'fve' => array( 'species' => 'fve', 'common_name' => 'Fragaria vesca', 'tax_id' => '57918', 'version' => 'V4.0.a2' ), 'fan' => array( 'species' => 'fan', 'common_name' => 'Fragaria x ananassa', 'tax_id' => '3747', 'version' => 'V1.0.a1' ), 'gma' => array( 'species' => 'gma', 'common_name' => 'Glycine max', 'tax_id' => '3847', 'version' => 'JGI Wm82.a4.v1' ), 'ghi' => array( 'species' => 'ghi', 'common_name' => 'Gossypium hirsutum', 'tax_id' => '3635', 'version' => 'v2.1' ), 'gra' => array( 'species' => 'gra', 'common_name' => 'Gossypium raimondii', 'tax_id' => '29730', 'version' => 'v2.1' ), 'han' => array( 'species' => 'han', 'common_name' => 'Helianthus annuus', 'tax_id' => '4232', 'version' => 'r1.2' ), 'hma' => array( 'species' => 'hma', 'common_name' => 'Hydrangea macrophylla', 'tax_id' => '23110', 'version' => 'v2.1' ), 'lsa' => array( 'species' => 'lsa', 'common_name' => 'Lactuca sativa', 'tax_id' => '4236', 'version' => 'v8.0' ), 'lonja' => array( 'species' => 'lonja', 'common_name' => 'Lonicera japonica', 'tax_id' => '105884', 'version' => 'v1.0' ), 'lja' => array( 'species' => 'lja', 'common_name' => 'Lotus japonicus', 'tax_id' => '34305', 'version' => 'Lj1.0v1' ), 'lal' => array( 'species' => 'lal', 'common_name' => 'Lupinus albus', 'tax_id' => '3870', 'version' => 'v1.0' ), 'mbi' => array( 'species' => 'mbi', 'common_name' => 'Magnolia biondii', 'tax_id' => '86725', 'version' => 'v1.0' ), 'mdo' => array( 'species' => 'mdo', 'common_name' => 'Malus domestica', 'tax_id' => '3750', 'version' => 'GDDH13 v1.1' ), 'mes' => array( 'species' => 'mes', 'common_name' => 'Manihot esculenta', 'tax_id' => '3983', 'version' => 'v8.1' ), 'mpo' => array( 'species' => 'mpo', 'common_name' => 'Marchantia polymorpha', 'tax_id' => '3197', 'version' => 'JGI v3.1' ), 'mtr' => array( 'species' => 'mtr', 'common_name' => 'Medicago truncatula', 'tax_id' => '3880', 'version' => 'JGI Mt4.0v1' ), 'mco' => array( 'species' => 'mco', 'common_name' => 'Micromonas commoda', 'tax_id' => '296587', 'version' => 'JGI v3.0' ), 'nnu' => array( 'species' => 'nnu', 'common_name' => 'Nelumbo nucifera', 'tax_id' => '4432', 'version' => 'v2.0' ), 'nta' => array( 'species' => 'nta', 'common_name' => 'Nicotiana tabacum', 'tax_id' => '4097', 'version' => 'Edwards2017' ), 'oeu' => array( 'species' => 'oeu', 'common_name' => 'Olea europaea', 'tax_id' => '4146', 'version' => 'v1.0' ), 'osa' => array( 'species' => 'osa', 'common_name' => 'Oryza sativa ssp. japonica', 'tax_id' => '39947', 'version' => 'IRGSP-1.0-2021-05-10' ), 'pso' => array( 'species' => 'pso', 'common_name' => 'Papaver somniferum', 'tax_id' => '3469', 'version' => 'ASM357369v1' ), 'pax' => array( 'species' => 'pax', 'common_name' => 'Petunia axillaris', 'tax_id' => '33119', 'version' => 'Sol Genomics v1.6.2' ), 'pvu' => array( 'species' => 'pvu', 'common_name' => 'Phaseolus vulgaris', 'tax_id' => '3885', 'version' => 'v2.1' ), 'ppa' => array( 'species' => 'ppa', 'common_name' => 'Physcomitrium patens', 'tax_id' => '3218', 'version' => 'JGI v3.3' ), 'psa' => array( 'species' => 'psa', 'common_name' => 'Pisum sativum', 'tax_id' => '3888', 'version' => 'V1.0a' ), 'ptr' => array( 'species' => 'ptr', 'common_name' => 'Populus trichocarpa', 'tax_id' => '3694', 'version' => 'JGI v4.1' ), 'pco' => array( 'species' => 'pco', 'common_name' => 'Prasinoderma coloniale', 'tax_id' => '156133', 'version' => 'v1.0' ), 'ppe' => array( 'species' => 'ppe', 'common_name' => 'Prunus persica', 'tax_id' => '3760', 'version' => 'v2.1' ), 'pgr' => array( 'species' => 'pgr', 'common_name' => 'Punica granatum', 'tax_id' => '22663', 'version' => 'ASM765513v2' ), 'qlo' => array( 'species' => 'qlo', 'common_name' => 'Quercus lobata', 'tax_id' => '97700', 'version' => 'v3.0' ), 'rsi' => array( 'species' => 'rsi', 'common_name' => 'Rhododendron simsii', 'tax_id' => '118357', 'version' => 'v1.0' ), 'rch' => array( 'species' => 'rch', 'common_name' => 'Rosa chinensis', 'tax_id' => '74649', 'version' => 'v2.0' ), 'sbr' => array( 'species' => 'sbr', 'common_name' => 'Salix brachista', 'tax_id' => '2182728', 'version' => 'v1.0' ), 'sbo' => array( 'species' => 'sbo', 'common_name' => 'Salvia bowleyana', 'tax_id' => '424416', 'version' => 'v1.0' ), 'shi' => array( 'species' => 'shi', 'common_name' => 'Sapria himalayana', 'tax_id' => '289637', 'version' => 'v1.0' ), 'spa' => array( 'species' => 'spa', 'common_name' => 'Schrenkiella parvula', 'tax_id' => '98039', 'version' => 'v2.2' ), 'sed' => array( 'species' => 'sed', 'common_name' => 'Sechium edule', 'tax_id' => '184140', 'version' => 'v1.0' ), 'smo' => array( 'species' => 'smo', 'common_name' => 'Selaginella moellendorffii', 'tax_id' => '88036', 'version' => 'v1.0' ), 'sun' => array( 'species' => 'sun', 'common_name' => 'Selenicereus undatus', 'tax_id' => '176265', 'version' => 'v1.0' ), 'sgi' => array( 'species' => 'sgi', 'common_name' => 'Sequoiadendron giganteum', 'tax_id' => '99814', 'version' => 'V2.0' ), 'sci' => array( 'species' => 'sci', 'common_name' => 'Simmondsia chinensis', 'tax_id' => '3999', 'version' => 'sc1' ), 'sly' => array( 'species' => 'sly', 'common_name' => 'Solanum lycopersicum', 'tax_id' => '4081', 'version' => 'ITAG4.0' ), 'spe' => array( 'species' => 'spe', 'common_name' => 'Solanum pennellii', 'tax_id' => '28526', 'version' => 'V2.0' ), 'stu' => array( 'species' => 'stu', 'common_name' => 'Solanum tuberosum', 'tax_id' => '4113', 'version' => 'JGI v4.03' ), 'sas' => array( 'species' => 'sas', 'common_name' => 'Striga asiatica', 'tax_id' => '4170', 'version' => 'v2.02' ), 'tha' => array( 'species' => 'tha', 'common_name' => 'Tarenaya hassleriana', 'tax_id' => '28532', 'version' => 'RefSeq v1' ), 'tca' => array( 'species' => 'tca', 'common_name' => 'Theobroma cacao', 'tax_id' => '3641', 'version' => 'V2.1' ), 'tpr' => array( 'species' => 'tpr', 'common_name' => 'Trifolium pratense', 'tax_id' => '57577', 'version' => 'V2.0' ), 'twi' => array( 'species' => 'twi', 'common_name' => 'Tripterygium wilfordii', 'tax_id' => '458696', 'version' => 'ASM1340144v1' ), 'tar' => array( 'species' => 'tar', 'common_name' => 'Trochodendron aralioides', 'tax_id' => '4407', 'version' => 'v1.0' ), 'ugi' => array( 'species' => 'ugi', 'common_name' => 'Utricularia gibba', 'tax_id' => '13748', 'version' => 'v1.1F' ), 'vma' => array( 'species' => 'vma', 'common_name' => 'Vaccinium macrocarpon', 'tax_id' => '13750', 'version' => 'V1.0' ), 'vpl' => array( 'species' => 'vpl', 'common_name' => 'Vanilla planifolia', 'tax_id' => '51239', 'version' => 'Elo Vpla-A Principal v1.0' ), 'vmu' => array( 'species' => 'vmu', 'common_name' => 'Vigna mungo', 'tax_id' => '3915', 'version' => 'ASM1342719v1' ), 'vvi' => array( 'species' => 'vvi', 'common_name' => 'Vitis vinifera', 'tax_id' => '29760', 'version' => 'Genoscope.12x' ), 'zma' => array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) ) $allow_async_use = true $sidebar_information = array( 'type' => 'gf', 'id' => 'HOM05D000545' ) $data_identifier = 'HOM05D000545' $data_type = 'gf_id' $species_gene_counts = array( 'bna' => (int) 33, 'aar' => (int) 7, 'aag' => (int) 1, 'ach' => (int) 16, 'amhyb' => (int) 6, 'aly' => (int) 12, 'aox' => (int) 5, 'arhy' => (int) 19, 'ath' => (int) 10, 'atr' => (int) 6, 'acertr' => (int) 8, 'cqu' => (int) 11, 'bca' => (int) 39, 'bol' => (int) 19, 'bra' => (int) 17, 'can' => (int) 17, 'cansat' => (int) 6, 'chi' => (int) 10, 'cru' => (int) 9, 'car' => (int) 8, 'cbr' => (int) 2, 'ccan' => (int) 8, 'cde' => (int) 7, 'cfa' => (int) 5, 'ccl' => (int) 6, 'cil' => (int) 12, 'cla' => (int) 8, 'col' => (int) 7, 'cpa' => (int) 7, 'csa' => (int) 6, 'camsi' => (int) 15, 'dca' => (int) 9, 'din' => (int) 13, 'dzi' => (int) 17, 'eca' => (int) 5, 'bvu' => (int) 6, 'egr' => (int) 8, 'fan' => (int) 27, 'fve' => (int) 6, 'gma' => (int) 21, 'ghi' => (int) 33, 'gra' => (int) 17, 'vvi' => (int) 7, 'han' => (int) 12, 'cav' => (int) 6, 'hma' => (int) 7, 'vpl' => (int) 8, 'sun' => (int) 7, 'lal' => (int) 18, 'lonja' => (int) 5, 'lja' => (int) 9, 'lsa' => (int) 8, 'mes' => (int) 12, 'mpo' => (int) 1, 'mbi' => (int) 6, 'mco' => (int) 1, 'mdo' => (int) 11, 'mtr' => (int) 8, 'cme' => (int) 6, 'egut' => (int) 8, 'ama' => (int) 11, 'nta' => (int) 25, 'nnu' => (int) 7, 'oeu' => (int) 19, 'osa' => (int) 11, 'pax' => (int) 10, 'pgr' => (int) 7, 'stu' => (int) 11, 'pvu' => (int) 9, 'ptr' => (int) 11, 'ppa' => (int) 2, 'ppe' => (int) 6, 'psa' => (int) 9, 'pso' => (int) 12, 'qlo' => (int) 10, 'rch' => (int) 7, 'rsi' => (int) 9, 'sbr' => (int) 9, 'sbo' => (int) 7, 'sci' => (int) 7, 'sed' => (int) 10, 'sgi' => (int) 6, 'sas' => (int) 13, 'shi' => (int) 1, 'smo' => (int) 1, 'sly' => (int) 10, 'spe' => (int) 10, 'spa' => (int) 10, 'tar' => (int) 12, 'tha' => (int) 12, 'tca' => (int) 7, 'esa' => (int) 10, 'tpr' => (int) 9, 'twi' => (int) 13, 'ugi' => (int) 4, 'vma' => (int) 9, 'vmu' => (int) 8, 'zma' => (int) 14 ) $gf_gene_species = 'zma' $gf_gene_id = 'Zm00001eb430970' $species_info = array( 'species' => 'zma', 'common_name' => 'Zea mays', 'tax_id' => '4577', 'version' => 'NAM v5.0' ) $local_species = 'zma' $disabled = '' $selected = '' $num_hits = (int) 1